BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B07SP1|AL426961
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1738 0.0
3x_Contig1800 118 2e-26
>3x_Contig1802
Length = 45229
Score = 1738 bits (871), Expect = 0.0
Identities = 880/889 (98%)
Strand = Plus / Plus
Query: 1 gatcgtcattgatggagatgtttatgatataactggtttcctcagcaagcacccaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44156 gatcgtcattgatggagatgtttatgatataactggtttcctcagcaagcacccaggagg 44215
Query: 61 tgtcacaaggctgatggaatttgcaggcagagatgctactgaaagattccatcaaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44216 tgtcacaaggctgatggaatttgcaggcagagatgctactgaaagattccatcaaatgca 44275
Query: 121 ttcctctgcaatgctggagaagatgaaggagcacctaacgtatatcggaaaactgaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44276 ttcctctgcaatgctggagaagatgaaggagcacctaacgtatatcggaaaactgaaagg 44335
Query: 181 tgcattcgacgaagagctatcagaggaagagataaggattatggaacagaagtctaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44336 tgcattcgacgaagagctatcagaggaagagataaggattatggaacagaagtctaaaat 44395
Query: 241 cccatctttgagcaaagtgttttgtatctctgactttgaggcgattgccaagcaagtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44396 cccatctttgagcaaagtgttttgtatctctgactttgaggcgattgccaagcaagtttt 44455
Query: 301 gccgaaatctactttcttctactatgctaccggrtcctctatgaatttacgttacgggrg 360
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 44456 gccgaaatctactttcttctactatgctaccggatcctctatgaatttacgttacgggag 44515
Query: 361 aaccactatgcgtatagtagggttttcttcagacccaaggccttacaggatcttgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44516 aaccactatgcgtatagtagggttttcttcagacccaaggccttacaggatcttgatgaa 44575
Query: 421 gtgaacactactactaaattcctaggagccaaggtcgatctccctgtatacatcactgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44576 gtgaacactactactaaattcctaggagccaaggtcgatctccctgtatacatcactgca 44635
Query: 481 tttgcaggatccagattggctcaccctctcggggaactaaacttgcagtctgccgcttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44636 tttgcaggatccagattggctcaccctctcggggaactaaacttgcagtctgccgcttac 44695
Query: 541 aatgccaatgtgatgcagatggtaccgaagcagaattcgtacagccacgaagaattcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44696 aatgccaatgtgatgcagatggtaccgaagcagaattcgtacagccacgaagaattcttc 44755
Query: 601 ccacacgttccagacgatcagaaccactggctgcagtaccattttsacacgcaagaagaa 660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 44756 ccacacgttccagacgatcagaaccactggctgcagtaccattttgacacgcaagaagaa 44815
Query: 661 ctagacaacttggagaattgggtgaagaaagcaggaaccatgccaagtgtcaagggcttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44816 ctagacaacttggagaattgggtgaagaaagcaggaaccatgccaagtgtcaagggcttg 44875
Query: 721 tttttcaacgtggacttgaatgacattggcaatcgagaaaasgattcaaggcagagagct 780
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 44876 tttttcaacgtggacttgaatgacattggcaatcgagaaaaggattcaaggcagagagct 44935
Query: 781 tcccaagctggragcgmgtatctgaacgamatgactgacaamaagtttggaactcaccct 840
||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 44936 tcccaagctggaagcgagtatctgaacgaaatgactgacaacaagtttggaactcaccct 44995
Query: 841 aagatcacctggvaaaccatcgatagagtcatgcagaatacggctttgc 889
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 44996 aagatcacctggaaaaccatcgatagagtcatgcagaatacggctttgc 45044
>3x_Contig1800
Length = 38778
Score = 118 bits (59), Expect = 2e-26
Identities = 285/361 (78%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 514 gaactaaacttgcagtctgccgcttacaatgccaatgtgatgcagatggtaccgaagcag 573
||||| |||||||| ||||| |||||| |||| || || ||||| ||||| || || |||
Sbjct: 18683 gaactgaacttgcaatctgcggcttacgatgctaacgttatgcaaatggtgccaaaacag 18624
Query: 574 aattcgtacagccacgaagaattcttcccacacgttccagacgatcagaaccactggctg 633
|| || |||||||| ||||||||||||||||| || ||||| ||||| ||||| ||| ||
Sbjct: 18623 aactcctacagccatgaagaattcttcccacatgtcccagatgatcaaaaccaatggttg 18564
Query: 634 cagtaccattttsacacgcaagaagaactagacaacttggagaattgggtgaagaaagca 693
|| | ||| ||| |||| ||||||||||| || |||||||| || ||||| | | ||||
Sbjct: 18563 caattccactttgacactcaagaagaacttgataacttggataaatgggtcgaaagagca 18504
Query: 694 ggaaccatgccaagtgtcaagggcttgtttttcaacgtgga-cttgaatgacattggcaa 752
|| || | ||||||| ||||| ||||||||||| || || |||| | || ||||||||
Sbjct: 18503 ggcactctaccaagtgctaaggggttgtttttcaatgtagatcttgca-gatattggcaa 18445
Query: 753 tcgagaaaasgattcaaggcagagagcttcccaagctggragcgmgtatctgaacgamat 812
||||||| || ||||| || ||||| || ||| |||| || | || | | || ||
Sbjct: 18444 cagagaaaaggactcaagacaaagagcctctcaacctggtagtgaatacttagatgaaat 18385
Query: 813 gactgacaamaagtttggaactcaccctaagatcacctggvaaaccatcgatagagtcat 872
|||||| || ||||| |||| ||| || ||||| |||||| |||||||| ||||||||
Sbjct: 18384 gactgataataagttcggaagtcatccaaagattacctggagcaccatcgagagagtcat 18325
Query: 873 g 873
|
Sbjct: 18324 g 18324
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4734
Number of Sequences: 1807
Number of extensions: 4734
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 2
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)